Resources for patients, gastroenterologists and other clinicians using Hydrogen-Methane Breath Testing results

Information for patients with an abnormal lactulose breath test indicating SIBO

Small intestinal bacterial overgrowth, or SIBO, is not the same in all people. Everyone has a different mix of bacterial species, and the sources of the bacteria, the normal bacterial population of the colon or large intestine and/or the oral bacterial flora, are also different in each person. SIBO can cause no symptoms, symptoms such as bloating, diarrhea, or constipation, or more severe symptoms such as diarrhea with malabsorption and weight loss. There is not a single treatment that is best for all patients, and there is currently no single treatment for SIBO that will “cure” everyone. There are multiple diseases and types of surgical history that can increase the risk for SIBO and medications that reduce stomach acid, for example, can also increase the risk.

If you have an abnormal lactulose breath test with an abnormal level of either hydrogen or methane or both, you and your physician will need to decide about treatment.  A minority of patients have no methane and very low hydrogen, the “flatline” gas pattern, which is thought to indicate SIBO with hydrogen sulfide production and this also can respond to treatment.  While physicians with MD or DO degrees typically offer antibiotic treatment for SIBO with rifaximin (Xifaxan), and also neomycin or metronidazole for patients who have an elevated methane level or “flatline” result on lactulose breath testing, this is not the only form of treatment available. Naturopaths, health care practitioners with ND degrees, more often use a combination of dietary guidance and use of some antimicrobial herbal preparations. Some MD and DO physicians are offering this treatment to some patients as well. Another possible initial treatment is a 2 week elemental diet, which is using shakes with simple nutrients that do not require digestion as the sole source of calories. There have been some small studies that have shown improvement in breath test results after 4-6 weeks of certain probiotics, but there are also studies showing no improvement in breath testing for SIBO after probiotics.

Rifaximin (Xifaxan) is a special antibiotic that must be dissolved in bile to have its antibacterial effect, and very little of this antibiotic is absorbed into the blood stream. This results in much less of an effect on the normal colonic bacteria than from most other antibiotics. But neomycin and metronidazole do affect the colonic bacteria.   There have been rare cases in which Clostridium difficile colitis has occurred during treatment with rifaximin, but in most of these cases another broad-spectrum antibiotic was also administered to the patient during the rifaximin treatment. Clostridium difficile or C diff grows in the colon when the normal bacterial flora has been reduced by antibiotic therapy, and can produce very severe diarrhea which can be fatal if it occurs in patients with other serious illnesses. Patients who have had C diff try to avoid being treated with antibiotics, and may be especially interested in treatment for SIBO that does not include oral antibiotics.

Experts suggest that it may be best not to limit carbohydrate intake during the initial treatment period to make the antibiotics or herbal treatment better at reducing the bacterial count. After eating a normal varied diet during treatment with antibiotics, herbal preparations, or 2 weeks of elemental diet, patients are advised to follow a diet that is lower in processed or refined carbohydrates, such as foods made from white flour, white rice, pastries, sodas, high-carb snacks, pasta, cakes and cookies, candy, and processed breakfast cereals. But it is not clear that there is a single diet that is best for all SIBO patients, and there are differences in the diet recommendations from the experts that I include on this website. Registered dieticians are very familiar with helping people with IBS and SIBO to analyze their usual diets and recommend the most important changes to make. Physicians can refer patients to dieticians, and any fees involved in seeing a dietician are usually very reasonable.

After initial treatment with antibiotics, herbal combinations, or elemental diet, and diet modification, another part of treatment is to improve the motility of the small intestine. The experts in SIBO are in agreement that one of the important causes of SIBO is disturbance the in motility or contraction of the small intestine. In particular, the strong contractions that clear out the small bowel during fasting, called migrating motor complexes or MMCs, are often weaker in people with SIBO. There is evidence that using either a very small dose of erythromycin (50-75 mg) or 0.5 mg prucalopride (which is now available by prescription in the US as a 1 mg or 2 mg pill under the brand name Motegrity) on an empty stomach at bedtime can help prevent recurrence of SIBO symptoms. Eating 3 main meals, but no eating for a few hours before bedtime, and avoiding snacks, provides longer fasting periods and a greater chance that the normal stronger small intestinal contractions that should occur during fasting will occur.

Dr. Mark Pimentel has written an article for physicians about SIBO and treatment with antibiotics and diet.  Dr Pimentel and his colleagues Dr. Ali Rezaie and Dr. Satish Rao published an article about treatment of SIBO (this cannot be downloaded for free but is available through medical libraries or downloading from the publisher for a small fee).  Dr. Pimentel also led a study of the use of elemental diet for initial treatment of SIBO.  The Physician’s Elemental Diet is one example of this, and bags of powder to prepare these shakes can be purchased on-line.  A study from 2013 compared antibiotics to herbal combinations as initial treatment for SIBO.  I created a page listing the herbal preparations from that study with links to purchase the products on Amazon.com.  Dr. Allison Siebecker, another SIBO expert, has an excellent website explaining SIBO, herbal treatment and diet which includes an 8-page diet chart.  Another herbal preparation used to treat SIBO is Atrantil, a combination herbal product created by a team led by a gastroenterologist, which in some small studies was more effective than placebo in improving symptoms.  A handout with a different version of dietary guidelines for SIBO patient is available from Dr. Pimentel’s group at Cedars Sinai Medical Center.  Some patients do well following the low FODMAP diet developed by physicians and dieticians at Monash University in Melbourne, Australia.  The GI department at the University of Michigan created a website about the low FODMAP diet to help patients do that.  The diet from the book The Microbiome Solution by Robynne Chutkan, MD, can also help patients with SIBO.  Dr. Chutkan, who has written other books, has made diet part of treatment for all her patients with gastrointestinal conditions and tries to help patients avoid unnecessary antibiotic treatment and avoid unnecessary exposure to hormones, antibiotics and other chemicals in food.

I recently read an article by Steven Hirsch about his experience with treatment for SIBO and his communications with Dr. Mark Pimentel.  I read this article in Medium. Anyone can visit the Medium site on a computer or Medium app on a smartphone for free initially, but after a number of visits then a subscription fee must be paid to join for continued access.

I hope that this introduction and the resources below are helpful to patients and their health care providers as they treat the symptoms of SIBO.

For gastroenterologists and other health care providers treating SIBO:

The documents and website links included here are ones that I have found helpful in deciding how to treat patients with abnormal lactulose hydrogen-methane breath results.  My thanks to Allison Siebecker, ND, one of the creators of the NUNM SIBO Center, the authors of these resources at Cedars Sinai Medical Center in Los Angeles, The Johns Hopkins Hospital in Baltimore, the University Pittsburgh Medical Center, the University of Michigan Medical Center in Ann Arbor, and Dr. Kenneth Brown, the developer of Atrantil.

Note: For maintanence treatment to promote small intestinal motility during sleep, doses of erythromycin 75 mg are available by prescribing 250 mg erythromycin tablets and instructing patients to cut these in quarters. Prucalopride (Motegrity) 2 mg pills may be cut in quarters to give 0.5 mg doses to use for this purpose.

Small intestinal bacterial overgrowth_ Management – UpToDate

https://www.ncbi.nlm.nih.gov/pubmed/26780631

Pimentel-_A 14-day elemental diet is highly effective in normalizing the lactulose breath test

How to Order the Physicians Elemental Diet-1

Johns Hopkins-U Pittsburgh Herbal Rx for SIBO article

Links to Amazon-SIBO Herbal Treatments-1

https://atrantil.com/

low_fermentation-SIBO_diet-Cedars Sinai MC

https://www.monashfodmap.com/

http://myginutrition.com/diet.html

https://www.siboinfo.com/

A Siebecker-sibo_specific_diet_food_guide_sept_2014

Herbal treatment of SIBO-Siebecker

Robynne Chutkan diet-1

https://medium.com/@stkirsch/insights-from-mark-pimentel-on-the-treatment-of-sibo-c091bb5aa00